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57-479: The World Checklist of Selected Plant Families (usually abbreviated to WCSP ) was an "international collaborative programme that provides the latest peer reviewed and published opinions on the accepted scientific names and synonyms of selected plant families." Maintained by the Royal Botanic Gardens, Kew , it was available online, allowing searches for the names of families, genera and species, as well as

114-498: A model organism ). Free-living ciliates are usually the top heterotrophs and predators in microbial food webs, feeding on bacteria and smaller eukaryotes, present in a variety of ecosystems, although a few species are kleptoplastic . Others are parasitic of numerous animals. Ciliates have a basal position in the evolution of alveolates, together with a few species of heterotrophic flagellates with two cilia collectively known as colponemids . The remaining alveolates are grouped under

171-434: A German physician and botanist, is often considered the originator of Latin names for the rapidly increasing number of plants known to science. For instance he coined the name Digitalis in his De Historia Stirpium Commentarii Insignes (1542). A key event was Linnaeus’ adoption of binomial names for plant species in his Species Plantarum (1753). In the nineteenth century it became increasingly clear that there

228-421: A big portion of the oxygen produced worldwide, and comprising much of the marine phytoplankton ; the brown algae , filamentous or 'truly' multicellular (with differentiated tissues) macroalgae that constitute the basis of many temperate and cold marine ecosystems, such as kelp forests ; and the golden algae , unicellular or colonial flagellates that are mostly present in freshwater habitats. Inside Gyrista,

285-449: A collection of amoebae, flagellates and amoeboflagellates with complex life cycles, among which are some slime molds ( acrasids ). The two clades Euglenozoa and Percolozoa are sister taxa, united under the name Discicristata , in reference to their mitochondrial cristae shaped like discs. The species Tsukubamonas globosa is a free-living flagellate whose precise position within Discoba

342-601: A major cause of harmful algal blooms due to their toxicity; some live as symbionts of corals, allowing the creation of coral reefs. Dinoflagellates exhibit a diversity of cellular structures, such as complex eyelike ocelli, specialized vacuoles, bioluminescent organelles, and a wall surrounding the cell known as the theca . Rhizaria is a lineage of morphologically diverse organisms, composed almost entirely of unicellular heterotrophic amoebae, flagellates and amoeboflagellates, commonly with reticulose (net-like) or filose (thread-like) pseudopodia for feeding and locomotion. It

399-446: A new name may (or must) be coined. Plant taxonomy is an empirical science, a science that determines what constitutes a particular taxon (taxonomic grouping, plural: taxa): e.g. "What plants belong to this species?" and "What species belong to this genus?". The definition of the limits of a taxon is called its ' circumscription '. For a particular taxon, if two taxonomists agree exactly on its circumscription, rank and position (i.e.

456-469: A small group (3 species) of freshwater or marine suspension-feeding bacterivorous flagellates with typical excavate appearance, closely resembling Jakobida and some metamonads but not phylogenetically close to either in most analyses. Diaphoretickes includes nearly all photosynthetic eukaryotes. Within this clade, the TSAR supergroup gathers a colossal diversity of protists. The most basal branching member of

513-474: A variety of algae. In addition, two smaller groups, Haptista and Cryptista , also belong to Diaphoretickes. The Stramenopiles, also known as Heterokonta, are characterized by the presence of two cilia, one of which bears many short, straw-like hairs ( mastigonemes ). They include one clade of phototrophs and numerous clades of heterotrophs, present in virtually all habitats. Stramenopiles include two usually well-supported clades, Bigyra and Gyrista , although

570-420: A wide variety of animals – which act as secondary or intermediate host – but can undergo sexual reproduction only in the primary or definitive host (for example: felids such as domestic cats in this case). Some species, for example Plasmodium falciparum , have extremely complex life cycles that involve multiple forms of the organism, some of which reproduce sexually and others asexually. However, it

627-565: Is paraphyletic , with some analyses placing the root of the eukaryote tree within Metamonada. Discoba includes three major groups: Jakobida , Euglenozoa and Percolozoa . Jakobida are a small group (~20 species) of free-living heterotrophic flagellates, with two cilia, that primarily eat bacteria through suspension feeding; most are aquatic aerobes, with some anaerobic species, found in marine, brackish or fresh water. They are best known for their bacterial-like mitochondrial genomes. Euglenozoa

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684-585: Is a complementary project called the International Plant Names Index (IPNI), in which Kew is also involved. The IPNI aims to provide details of publication and does not aim to determine which are accepted species names. After a delay of about a year, newly published names were automatically added from the IPNI to the WCSP. The WCSP was also one of the underlying databases for The Plant List , created by Kew and

741-448: Is a genus Iris in plants and a genus Iris in animals). Botanical nomenclature has a long history, going back beyond the period when Latin was the scientific language throughout Europe, to Theophrastus (c. 370–287 BC), Dioscorides (c. 40 – 90 AD) and other Greek writers. Many of these works have come down to us in Latin translations. The principal Latin writer on botany was Pliny

798-440: Is a rich (>2,000 species) group of flagellates with very different lifestyles, including: the free-living heterotrophic (both osmo- and phagotrophic) and photosynthetic euglenids (e.g., the euglenophytes , with chloroplasts originated from green algae); the free-living and parasitic kinetoplastids (such as the trypanosomes ); the deep-sea anaerobic symbiontids ; and the elusive diplonemids . Percolozoa (~150 species) are

855-443: Is any eukaryotic organism that is not an animal , land plant , or fungus . Protists do not form a natural group, or clade , but are a polyphyletic grouping of several independent clades that evolved from the last eukaryotic common ancestor . Protists were historically regarded as a separate taxonomic kingdom known as Protista or Protoctista . With the advent of phylogenetic analysis and electron microscopy studies,

912-445: Is not yet settled, but is probably more closely related to Discicristata than to Jakobida. The metamonads (Metamonada) are a phylum of completely anaerobic or microaerophilic protozoa, primarily flagellates . Some are gut symbionts of animals such as termites , others are free-living, and others are parasitic. They include three main clades: Fornicata , Parabasalia and Preaxostyla . Fornicata (>140 species) encompasses

969-500: Is termed protistology . Protists are a diverse group of eukaryotes (organisms whose cells possess a nucleus ) that are primarily single-celled and microscopic but exhibit a wide variety of shapes and life strategies. They have different life cycles , trophic levels , modes of locomotion , and cellular structures . Although most protists are unicellular , there is a considerable range of multicellularity amongst them; some form colonies or multicellular structures visible to

1026-402: Is unclear how frequently sexual reproduction causes genetic exchange between different strains of Plasmodium in nature and most populations of parasitic protists may be clonal lines that rarely exchange genes with other members of their species. The pathogenic parasitic protists of the genus Leishmania have been shown to be capable of a sexual cycle in the invertebrate vector, likened to

1083-408: Is widespread among multicellular eukaryotes, it seemed unlikely until recently, that sex could be a primordial and fundamental characteristic of eukaryotes. The main reason for this view was that sex appeared to be lacking in certain pathogenic protists whose ancestors branched off early from the eukaryotic family tree. However, several of these "early-branching" protists that were thought to predate

1140-678: The Missouri Botanical Garden , which was unveiled in 2010, and subsequently superseded by World Flora Online . At the end of October 2022, the WCSP website, together with the World Checklist of Vascular Plants (WCVP) website, was closed and the data was transferred to the Plants of the World Online (POWO) database. This botany article is a stub . You can help Misplaced Pages by expanding it . Botanical nomenclature Within

1197-499: The bicosoecids , phagotrophic flagellates that consume bacteria, and the closely related Placidozoa , which consists of several groups of heterotrophic flagellates (e.g., the deep-sea halophilic Placididea ) as well as the intestinal commensals known as Opalinata (e.g., the human parasite Blastocystis , and the highly unusual opalinids , composed of giant cells with numerous nuclei and cilia, originally misclassified as ciliates). The alveolates (Alveolata) are characterized by

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1254-716: The bigyromonads , a group of bacterivorous or eukaryovorous phagotrophs. A small group of heliozoan-like heterotrophic amoebae, Actinophryida , has an uncertain position, either within or as the sister taxon of Ochrophyta. The little studied phylum Bigyra is an assemblage of exclusively heterotrophic organisms, most of which are free-living. It includes the Labyrinthulomycetes , among which are single-celled amoeboid phagotrophs, mixotrophs, and fungus-like filamentous heterotrophs that create slime networks to move and absorb nutrients, as well as some parasites. Also included in Bigyra are

1311-547: The diplomonads , with two nuclei (e.g., Giardia , genus of well-known parasites of humans), and several smaller groups of free-living, commensal and parasitic protists (e.g., Carpediemonas , retortamonads ). Parabasalia (>460 species) is a varied group of anaerobic, mostly endobiotic organisms, ranging from small parasites (like Trichomonas vaginalis , another human pathogen) to giant intestinal symbionts with numerous flagella and nuclei found in wood-eating termites and cockroaches . Preaxostyla (~140 species) includes

1368-532: The heterotrophic protists, known as protozoa , were considered part of the animal kingdom , while the phototrophic ones, called algae , were studied as part of the plant kingdom . Even after the creation of a separate protist kingdom, some minuscule animals (the myxozoans ) and 'lower' fungi (namely the aphelids , rozellids and microsporidians , collectively known as Opisthosporidia ) were studied as protists, and some algae (particularly red and green algae ) remained classified as plants. According to

1425-431: The monophyly of Bigyra is being questioned. Branching outside both Bigyra and Gyrista is a single species of enigmatic heterotrophic flagellates, Platysulcus tardus . Much of the diversity of heterotrophic stramenopiles is still uncharacterized, known almost entirely from lineages of genetic sequences known as MASTs (MArine STramenopiles), of which only a few species have been described. The phylum Gyrista includes

1482-480: The sequencing of entire genomes and transcriptomes , and electron microscopy studies of the flagellar apparatus and cytoskeleton . New major lineages of protists and novel biodiversity continue to be discovered, resulting in dramatic changes to the eukaryotic tree of life. The newest classification systems of eukaryotes do not recognize the formal taxonomic ranks (kingdom, phylum, class, order...) and instead only recognize clades of related organisms, making

1539-535: The Elder (23–79 AD). From Mediaeval times, Latin became the universal scientific language ( lingua franca ) in Europe. Most written plant knowledge was the property of monks, particularly Benedictine , and the purpose of those early herbals was primarily medicinal rather than plant science per se . It would require the invention of the printing press (1450) to make such information more widely available. Leonhart Fuchs ,

1596-562: The TSAR clade is Telonemia , a small (7 species) phylum of obscure phagotrophic predatory flagellates, found in marine and freshwater environments. They share some cellular similarities with the remaining three clades: Rhizaria , Alveolata and Stramenopiles , collectively known as the SAR supergroup . Another highly diverse clade within Diaphoretickes is Archaeplastida , which houses land plants and

1653-484: The World Online and World Flora Online make determinations as to whether a name is accepted , e.g. accepted species. If a name is not accepted, it may be because the name is a synonym for a name that is already accepted, and is listed as such. Another term is ambiguous to denote a name that is not accepted because its separate existence cannot be reliably determined. Protist A protist ( / ˈ p r oʊ t ɪ s t / PROH -tist ) or protoctist

1710-474: The ability to create checklists. The project traced its history to work done in the 1990s by Kew researcher Rafaël Govaerts on a checklist of the genus Quercus . Influenced by the Global Strategy for Plant Conservation , the project expanded. As of January 2013, 173 families of seed plants were included. Coverage of monocotyledon families was completed and other families were being added. There

1767-472: The anaerobic and endobiotic oxymonads , with modified mitochondria , and two genera of free-living microaerophilic bacterivorous flagellates Trimastix and Paratrimastix , with typical excavate morphology. Two genera of anaerobic flagellates of recent description and unique cell architecture, Barthelona and Skoliomonas , are closely related to the Fornicata. The malawimonads (Malawimonadida) are

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1824-501: The apicomplexans ( Apicomplexa ) are a large (>6,000 species) and highly specialized group of obligate parasites who have all secondarily lost their photosynthetic ability (e.g., Plasmodium falciparum , cause of malaria ). Their adult stages absorb nutrients from the host through the cell membrane, and they reproduce between hosts via sporozoites, which exhibit an organelle complex (the apicoplast ) evolved from non-photosynthetic chloroplasts. The other branch of Myzozoa contains

1881-450: The botanical ( ICN ) and the zoological ( ICZN ) codes of nomenclature . Protists display a wide range of distinct morphologies that have been used to classify them for practical purposes, although most of these categories do not represent evolutionary cohesive lineages or clades and have instead evolved independently several times. The most recognizable types are: In general, protists are typical eukaryotic cells that follow

1938-399: The clade Myzozoa , whose common ancestor acquired chloroplasts through a secondary endosymbiosis from a red alga. One branch of Myzozoa contains the apicomplexans and their closest relatives, a small clade of flagellates known as Chrompodellida where phototrophic and heterotrophic flagellates, called chromerids and colpodellids respectively, are evolutionarily intermingled. In contrast,

1995-470: The classification more stable in the long term and easier to update. In this new cladistic scheme, the protists are divided into various branches informally named supergroups . Most photosynthetic eukaryotes fall under the Diaphoretickes clade, which contains the supergroups Archaeplastida (which includes plants) and TSAR (including Telonemia , Stramenopiles , Alveolata and Rhizaria ), as well as

2052-446: The common characteristic of a ventral groove in the cell used for suspension feeding , which is considered to be an ancestral trait present in the last eukaryotic common ancestor . The Excavata is composed of three clades: Discoba , Metamonada and Malawimonadida , each including 'typical excavates' that are free-living phagotrophic flagellates with the characteristic ventral groove. According to most phylogenetic analyses, this group

2109-499: The current consensus, the term 'protist' specifically excludes animals, embryophytes (land plants) —meaning that all algae fall under this category— and all fungi, although lower fungi are often studied by protistologists and mycologists alike. The names of some protists (called ambiregnal protists), because of their mixture of traits similar to both animals and plants or fungi (e.g. slime molds and flagellated algae like euglenids ), have been published under either or both of

2166-761: The dinoflagellates and their closest relatives, the perkinsids ( Perkinsozoa ), a small group (26 species) of aquatic intracellular parasites which have lost their photosynthetic ability similarly to apicomplexans. They reproduce through flagellated spores that infect dinoflagellates, molluscs and fish . In contrast, the dinoflagellates ( Dinoflagellata ) are a highly diversified (~4,500 species) group of aquatic algae that have mostly retained their chloroplasts, although many lineages have lost their own and instead either live as heterotrophs or reacquire new chloroplasts from other sources, including tertiary endosymbiosis and kleptoplasty . Most dinoflagellates are free-living and compose an important portion of phytoplankton, as well as

2223-451: The emergence of meiosis and sex (such as Giardia lamblia and Trichomonas vaginalis ) are now known to descend from ancestors capable of meiosis and meiotic recombination , because they have a set core of meiotic genes that are present in sexual eukaryotes. Most of these meiotic genes were likely present in the common ancestor of all eukaryotes , which was likely capable of facultative (non-obligate) sexual reproduction. This view

2280-476: The higher rank in which it is included) then there is only one name which can apply under the ICN . Where they differ in opinion on any of these issues, one and the same plant may be placed in taxa with different names. As an example, consider Siehe's Glory-of-the-Snow, Chionodoxa siehei : In summary, if a plant has different names or is placed in differently named taxa: Various botanical databases such as Plants of

2337-494: The limits set by that code there is another set of rules, the International Code of Nomenclature for Cultivated Plants (ICNCP) which applies to plant cultivars that have been deliberately altered or selected by humans (see cultigen ). Botanical nomenclature is independent of other systems of nomenclature, for example zoological nomenclature . This implies that animals can have the same generic names as plants (e.g. there

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2394-535: The meiosis undertaken in the trypanosomes. The species diversity of protists is severely underestimated by traditional methods that differentiate species based on morphological characteristics. The number of described protist species is very low (ranging from 26,000 to 74,400 as of 2012) in comparison to the diversity of plants, animals and fungi, which are historically and biologically well-known and studied. The predicted number of species also varies greatly, ranging from 1.4×10 to 1.6×10 , and in several groups

2451-403: The naked eye. The term 'protist' is defined as a paraphyletic group of all eukaryotes that are not animals , plants or fungi . Because of this definition by exclusion, protists encompass almost all of the broad spectrum of biological characteristics expected in eukaryotes. The distinction between protists and the other three eukaryotic kingdoms has been difficult to settle. Historically,

2508-860: The number of predicted species is arbitrarily doubled. Most of these predictions are highly subjective. Molecular techniques such as environmental DNA barcoding have revealed a vast diversity of undescribed protists that accounts for the majority of eukaryotic sequences or operational taxonomic units (OTUs), dwarfing those from plants, animals and fungi. As such, it is considered that protists dominate eukaryotic diversity. Stramenopiles Alveolata Rhizaria Telonemia Haptista Microhelida Cryptista Archaeplastida Provora Hemimastigophora Meteora sporadica Discoba Metamonada Ancyromonadida Malawimonadida CRuMs Amoebozoa Breviatea Apusomonadida Opisthokonta The evolutionary relationships of protists have been explained through molecular phylogenetics ,

2565-442: The photosynthetic Ochrophyta or Heterokontophyta (>23,000 species), which contain chloroplasts originated from a red alga . Among these are many lineages of algae that encompass a wide range of structures and morphologies. The three most diverse ochrophyte classes are: the diatoms , unicellular or colonial organisms encased in silica cell walls ( frustules ) that exhibit widely different shapes and ornamentations, responsible for

2622-573: The phyla Cryptista and Haptista . The animals and fungi fall into the Amorphea supergroup, which contains the phylum Amoebozoa and several other protist lineages. Various groups of eukaryotes with primitive cell architecture are collectively known as the Excavata . Excavata is a group that encompasses diverse protists, mostly flagellates, ranging from aerobic and anaerobic predators to phototrophs and heterotrophs. The common name 'excavate' refers to

2679-539: The presence of cortical alveoli , cytoplasmic sacs underlying the cell membrane of unknown physiological function. Among them are three of the most well-known groups of protists: apicomplexans, dinoflagellates and ciliates. The ciliates ( Ciliophora ) are a highly diverse (>8,000 species) and probably the most thoroughly studied group of protists. They are mostly free-living microbes characterized by large cells covered in rows of cilia and containing two kinds of nuclei, micronucleus and macronucleus (e.g., Paramecium ,

2736-475: The remaining eukaryotes. Protists generally reproduce asexually under favorable environmental conditions, but tend to reproduce sexually under stressful conditions, such as starvation or heat shock. Oxidative stress , which leads to DNA damage , also appears to be an important factor in the induction of sex in protists. Eukaryotes emerged in evolution more than 1.5 billion years ago. The earliest eukaryotes were protists. Although sexual reproduction

2793-423: The same principles of physiology and biochemistry described for those cells within the "higher" eukaryotes (animals, fungi or plants): they are aerobic organisms that consume oxygen to produce energy through mitochondria , and those with chloroplasts perform carbon fixation through photosynthesis in chloroplasts . However, many have evolved a variety of unique physiological adaptations that do not appear in

2850-479: The sister clade to Ochrophyta are the predominantly osmotrophic and filamentous Pseudofungi (>1,200 species), which include three distinct lineages: the parasitic oomycetes or water moulds (e.g., Phytophthora infestans , the agent behind the Irish Potato Famine ), which encompass most of the pseudofungi species; the less diverse non-parasitic hyphochytrids that maintain a fungus-like lifestyle; and

2907-717: The study of environmental DNA and is still in the process of being fully described. They are present in all ecosystems as important components of the biogeochemical cycles and trophic webs . They exist abundantly and ubiquitously in a variety of forms that evolved multiple times independently, such as free-living algae , amoebae and slime moulds , or as important parasites . Together, they compose an amount of biomass that doubles that of animals. They exhibit varied types of nutrition (such as phototrophy , phagotrophy or osmotrophy ), sometimes combining them (in mixotrophy ). They present unique adaptations not present in multicellular animals, fungi or land plants. The study of protists

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2964-550: The use of Protista as a formal taxon was gradually abandoned. In modern classifications, protists are spread across several eukaryotic clades called supergroups , such as Archaeplastida ( photoautotrophs that includes land plants), SAR , Obazoa (which includes fungi and animals), Amoebozoa and Excavata . Protists represent an extremely large genetic and ecological diversity in all environments, including extreme habitats. Their diversity, larger than for all other eukaryotes, has only been discovered in recent decades through

3021-461: Was a need for rules to govern scientific nomenclature, and initiatives were taken to refine the body of laws initiated by Linnaeus. These were published in successively more sophisticated editions. For plants, key dates are 1867 ( lois de Candolle) and 1906 ( International Rules of Botanical Nomenclature , 'Vienna Rules'). The most recent is the Shenzhen Code , adopted in 2018. Another development

3078-416: Was adopted to govern the nomenclature of Bacteria, the International Code of Nomenclature of Bacteria . Botanical nomenclature is closely linked to plant taxonomy, and botanical nomenclature serves plant taxonomy, but nevertheless botanical nomenclature is separate from plant taxonomy. Botanical nomenclature is merely the body of rules prescribing which name applies to that taxon (see correct name ) and if

3135-580: Was further supported by a 2011 study on amoebae . Amoebae have been regarded as asexual organisms , but the study describes evidence that most amoeboid lineages are ancestrally sexual, and that the majority of asexual groups likely arose recently and independently. Even in the early 20th century, some researchers interpreted phenomena related to chromidia ( chromatin granules free in the cytoplasm ) in amoebae as sexual reproduction. Some commonly found protist pathogens such as Toxoplasma gondii are capable of infecting and undergoing asexual reproduction in

3192-505: Was the insight into the delimitation of the concept of 'plant'. Gradually more and more groups of organisms are being recognised as being independent of plants. Nevertheless, the formal names of most of these organisms are governed by the (ICN), even today. Some protists that do not fit easily into either plant or animal categories are treated under either or both of the ICN and the ICZN . A separate Code

3249-480: Was the last supergroup to be described, because it lacks any defining characteristic and was discovered exclusively through molecular phylogenetics . Three major clades are included, namely the phyla Cercozoa , Endomyxa and Retaria . Retaria contains the most familiar rhizarians: forams and radiolarians , two groups of large free-living marine amoebae with pseudopodia supported by microtubules , many of which are macroscopic. The radiolarians (Radiolaria) are

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