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Knockout rat

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A knockout rat is a genetically engineered rat with a single gene turned off through a targeted mutation ( gene trapping ) used for academic and pharmaceutical research . Knockout rats can mimic human diseases and are important tools for studying gene function ( functional genomics ) and for drug discovery and development. The production of knockout rats was not economically or technically feasible until 2008.

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89-686: Technology developed through funding from the National Institutes of Health (NIH) and work accomplished by the members of the Knock Out Rat Consortium (KORC) led to cost-effective methods to create knockout rats. The importance of developing the rat as a more versatile tool for human health research is evidenced by the $ 120 million investment made by the NIH via the Rat Genome Sequencing Project Consortium , resulting in

178-403: A zygote that develops into a new diploid organism. It is generally accepted that isogamy is the ancestral state from which anisogamy and oogamy evolved, although its evolution has left no fossil records. There are almost invariably only two gamete types, all analyses showing that intermediate gamete sizes are eliminated due to selection. Since intermediate sized gametes do not have

267-466: A certain percentage (2.8% in 2014) must be granted to small businesses under the SBIR/STTR program. As of 2011 , the extramural funding consisted of about 50,000 grants to more than 325,000 researchers at more than 3000 institutions. By 2018 , this rate of granting remained reasonably steady, at 47,000 grants to 2,700 organizations. In FY 2010 , NIH spent US$ 10.7bn (not including temporary funding from

356-499: A clinical trial, except for the most critically ill, as determined by the NIH Director. Over the last century, the responsibility to allocate funding has shifted from the OD and Advisory Committee to the individual ICs and Congress increasingly set apart funding for particular causes. In the 1970s, Congress began to earmark funds specifically for cancer research, and in the 1980s there was

445-468: A diverse research portfolio in order to capitalize on major discoveries in a variety of fields such as cell biology, genetics, physics, engineering, and computer science. Fourth, address public health needs according to the disease burden (e.g., prevalence and mortality). And fifth, construct and support the scientific infrastructure (e.g., well-equipped laboratories and safe research facilities) necessary to conduct research. Advisory committee members advise

534-467: A donor site, leaving no “footprint,” unlike Sleeping Beauty. The sleeping beauty (SB) transposon is a derivative of the Tc1/mariner superfamily of DNA transposons prevalent among both vertebrate and invertebrate genomes. However, endogenous DNA transposons from this family are completely inactive in vertebrate genomes. An active Tc1/mariner transposon, synthesized from alignment of inactive transposons from

623-399: A haploid ovum . Spermatogenesis , the process of male gamete formation in animals, involves meiosis in a diploid primary spermatocyte to produce haploid spermatozoa . In animals, ova are produced in the ovaries of females and sperm develop in the testes of males. During fertilization, a spermatozoon and an ovum, each carrying half of the genetic information of an individual, unite to form

712-721: A heart rate five to ten times as fast. It is widely believed that the rat is a better model than the mouse for human cardiovascular disease , diabetes, arthritis , and many autoimmune , neurological , behavioral, and addiction disorders. In addition, rat models are superior to mouse models for testing the pharmacodynamics and toxicity of potential therapeutic compounds, partially because the number and type of many of their detoxifying enzymes are very similar to those in humans. Their larger size makes rats more conducive to study by instrumentation, and also facilitates manipulation such as blood sampling, nerve conduction, and performing surgeries. Techniques for genetic manipulation are available in

801-427: A highly attractive mutagen geared toward gene discovery: 1) it has little bias for inserting within particular genomic regions or within specific recognition sequences, 2) de novo insertions of the transposon provide a “tagged” sequence marker for rapid identification of the specific mutation by simple PCR cloning methods, 3) in vivo SB insertional mutagenesis allows multiple mutations to be quickly and easily generated in

890-413: A library of knockout rats for later use. Once the random knockout mutations are created, more refined mutations such as conditional mutations can be created by breeding knockout lines with rat lines expressing CRE recombinase in a tissue specific manner. Knock-ins can be produced by recombination mediated cassette exchange. piggyBac (PB) DNA transposons mobilize via a "cut-and-paste" mechanism whereby

979-401: A life cycle involving alternation of diploid and haploid generations some differences from animal life cycles exist. Plants use meiosis to produce spores that develop into multicellular haploid gametophytes which produce gametes by mitosis. In animals there is no corresponding multicellular haploid phase. The sperm of plants that reproduce using spores are formed by mitosis in an organ of

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1068-493: A male mouse with ENU, and breeding with a wild type female to produce mutant offspring. ENU mutagenesis creates a high frequency of random mutations, with approximately one base pair change in any given gene in every 200-700 gametes. Despite its high mutagenicity, the physical penetration of ENU is limited and only about 500 genes are mutated for each male and a very small number of the total mutations have an observable phenotype. Thousands of mutations typically need to be created in

1157-538: A rate similar to inflation since the 1970s, research funding for the NIH nearly tripled through the 1990s and early 2000s, but has remained relatively stagnant since then. By the 1990s, the NIH committee focus had shifted to DNA research and launched the Human Genome Project . The NIH Office of the Director is the central office responsible for setting policy for NIH, and for planning, managing, and coordinating

1246-522: A reproductive technique for same-sex male couples, although a surrogate mother would still be required for the gestation period. Women who have passed menopause may be able to produce eggs and bear genetically related children with artificial gametes. Robert Sparrow wrote, in the Journal of Medical Ethics , that embryos derived from artificial gametes could be used to derive new gametes and this process could be repeated to create multiple human generations in

1335-400: A series of audit reports revealing that throughout the fiscal years 2000–2010, institutes under the aegis of the NIH did not comply with the time and amount requirements specified in appropriations statutes, in awarding federal contracts to commercial partners, committing the federal government to tens of millions of dollars of expenditure ahead of appropriation of funds from Congress. The NIH

1424-440: A short generation time, and are genetically inbred. While mice have proven to be a useful rodent model and techniques have been developed for routine disruption of their genes, in many circumstances rats are considered a superior laboratory animal for studying and modeling human disease. Rats are physiologically more similar to humans than are mice. For example, rats have a heart rate more similar to that of humans, while mice have

1513-514: A significant amount allocated for AIDS/HIV research. Funding for the NIH has often been a source of contention in Congress, serving as a proxy for the political currents of the time. During the 1980s, President Reagan repeatedly tried to cut funding for research, only to see Congress partly restore funding. The political contention over NIH funding slowed the nation's response to the AIDS epidemic; while AIDS

1602-444: A simple consensus sequence, 5’TTTT’A-3’ (along with minor variations of this sequence). Integrated L1 sequences are often truncated at the 5’ end, with an average total size of 1 Kb, many containing only 3’ terminal sequences. The nature of retrotransposition endows the L1 with some unique advantages; L1 retrotransposons have an essentially unlimited supply of the insertional mutagen since it

1691-498: A single animal in order to generate one novel phenotype. Despite recent improvements in ENU technology, mapping mutations responsible for a particular phenotype is typically difficult and time-consuming. Neutral mutations must be separated from causative mutations, via extensive breeding. ENU and cloning methods are simply inefficient for creating and mapping gene knockouts in rats for the creation of new models of human disease. Through 2007,

1780-443: A single animal, and in a single tissue, such as an adenomatous polyp. Transposons and retrotransposons are valuable tools for unbiased gene discovery as mobile pieces of DNA used for gene disruption. Retrotransposons, such as LINEs (long interspersed nuclear elements), mobilize via a “copy and paste” mechanism and are abundant in many eukaryotic species. Several L1 retrotransposons have remained active in mice and humans. L1s contain

1869-407: A single human sperm cell. The type of gamete an organism produces determines its sex and sets the basis for the sexual roles and sexual selection . In humans and other species that produce two morphologically distinct types of gametes, and in which each individual produces only one type , a female is any individual that produces the larger type of gamete called an ovum , and a male produces

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1958-619: A site in DNA, then produce a copy via RT. These proteins exhibit an overwhelming specificity for binding to and acting on the transcript that encodes them, enabling near exclusive mobilization of the parental L1 RNA. Using the RT activity of the ORF2 protein, the transcribed L1 RNA is copied into DNA by a process termed target primed reverse transcription (TPRT), and integrated into the genome. Integration occurs with little bias for any particular genomic region, requiring

2047-406: A small internal promoter within a 5’ untranslated region to drive expression, two open reading frames (ORFs), and a 3’ untranslated region containing sequences for polyadenylation. The two ORFs encode proteins necessary for autonomous retrotransposition; ORF1 encodes an RNA -binding protein while ORF2 encodes a protein containing endonuclease (EN) and reverse transcriptase (RT) activity, which nick

2136-415: A successful gene knockout approach in mammals by permitting random mutagenesis directly in the germ cells ( sperm and oocytes ) of mammalian model organisms, including rats. Using this technology, genes are disrupted completely and in a stable manner, are knocked out at a high frequency, and are randomly disrupted throughout the entire genome. The genomic location of mutations can be easily mapped, creating

2225-411: A transposase enzyme (PB transposase), encoded by the transposon itself, excises and re-integrates the transposon at other sites within the genome. PB transposase specifically recognizes PB inverted terminal repeats (ITRs) that flank the transposon; it binds to these sequences and catalyzes excision of the transposon. PB then integrates at TTAA sites throughout the genome, in a relatively random fashion. For

2314-600: Is available to the general public whereas the individual-level data is accessible to researchers. According to the City Journal NIH denies access to such attributes as intelligence, education and health on the grounds that studying their genetic basis would be stigmatizing. The NIH partnered with Moderna in 2020 during the COVID-19 pandemic to develop a vaccine. The final phase of testing began on July 27 with up to 30,000 volunteers assigned to one of two groups—one receiving

2403-591: Is composed of 27 separate institutes and centers that conduct and coordinate biomedical research. These are: In addition, the National Center for Research Resources operated from April 13, 1962, to December 23, 2011. The Advanced Research Projects Agency for Health (ARPA-H) is an entity formerly within the Office of the United States Secretary of Health and Human Services , which was created by Congress in

2492-503: Is continually transcribed from a promoter, which would be useful for applications where large numbers of mutations are needed in a single cell. L1 elements also demonstrate widespread genomic coverage, with a largely random distribution of insertions. L1 insertions at genomic sites are also irreversible, and thus any mutagenic event caused by an L1 insertion is “tagged” by L1 sequences. National Institutes of Health The National Institutes of Health , commonly referred to as NIH ,

2581-443: Is determined by the scientist. The total number of applicants has increased substantially, from about 60,000 investigators who had applied during the period from 1999 to 2003 to slightly less than 90,000 in who had applied during the period from 2011 to 2015. Due to this, the "cumulative investigator rate", that is, the likelihood that unique investigators are funded over a 5-year window, has declined from 43% to 31%. R01 grants are

2670-488: Is requesting $ 2.5 billion for 2024. Source: Gamete A gamete ( / ˈ ɡ æ m iː t / ; from Ancient Greek γαμετή ( gametḗ )  'wife', ultimately from Ancient Greek γάμος ( gámos )  'marriage') is a haploid cell that fuses with another haploid cell during fertilization in organisms that reproduce sexually . Gametes are an organism's reproductive cells , also referred to as sex cells . The name gamete

2759-517: Is that SCNT is extremely inefficient. The first published attempt had a success rate of less than 1%. Alternatively, ENU mutagenesis is a common random mutagenesis gene knockout strategy in the mouse that can also be used in the rat. ENU mutagenesis involves using a chemical, N-ethyl-N-nitrosourea (ENU), to create single base changes in the genome. ENU transfers its ethyl group to oxygen or nitrogen radicals in DNA, resulting in mis-pairing and base pair substitution. Mutant animals can be produced by injecting

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2848-811: Is the primary agency of the United States government responsible for biomedical and public health research. It was founded in 1887 and is now part of the United States Department of Health and Human Services . Many NIH facilities are located in Bethesda, Maryland , and other nearby suburbs of the Washington metropolitan area , with other primary facilities in the Research Triangle Park in North Carolina and smaller satellite facilities located around

2937-581: The American Recovery and Reinvestment Act of 2009 ) on clinical research , US$ 7.4bn on genetics -related research, US$ 6.0bn on prevention research, US$ 5.8bn on cancer, and US$ 5.7bn on biotechnology . In 2008 a Congressional mandate called for investigators funded by the NIH to submit an electronic version of their final manuscripts to the National Library of Medicine 's research repository, PubMed Central (PMC), no later than 12 months after

3026-496: The Consolidated Appropriations Act, 2022 . Modeled after DARPA , HSARPA , IARPA , and ARPA-E , it is intended to pursue unconventional research projects through methods not typically used by federal agencies or private sector companies. Secretary Xavier Becerra delegated ARPA-H to the NIH on May 24, 2022. It received $ 1 billion in appropriations in 2022, and $ 1.5 billion in 2023, and as of June 2023 it

3115-661: The Hygienic Laboratory , was established within the Marine Hospital Service , which at the time was expanding its functions beyond the system of Marine Hospitals into quarantine and research programs. It was initially located at the New York Marine Hospital on Staten Island . In 1891, it moved to the top floor of the Butler Building in Washington, D.C. In 1904, it moved again to a new campus at

3204-733: The Old Naval Observatory , which grew to include five major buildings. In 1901, the Division of Scientific Research was formed, which included the Hygienic Laboratory as well as other research offices of the Marine Hospital Service. In 1912, the Marine Hospital Service became the Public Health Service (PHS). In 1922, PHS established a Special Cancer Investigations laboratory at Harvard Medical School . This marked

3293-672: The Wuhan Institute of Virology (WIV)—which has been at the center of speculation since early 2020 that SARS-CoV-2 may have escaped in a lab incident. Under political pressure, the NIH withdrew funding to EcoHealth Alliance in July 2020. On February 13, 2012, the National Institutes of Health (NIH) announced a new group of individuals assigned to research pain. This committee is composed of researchers from different organizations and will focus to "coordinate pain research activities across

3382-550: The mRNA-1273 vaccine and the other receiving salt water injections—and continued until there had been approximately 100 cases of COVID-19 among the participants. In 2021, the NIH contributed $ 4,395,399 towards the Accelerating COVID-19 Therapeutic Interventions and Vaccines (ACTIV) program. Following the outbreak of the COVID-19 pandemic , NIH-funded EcoHealth Alliance has been the subject of controversy and increased scrutiny due to its ties to

3471-577: The 21 drugs with the highest therapeutic impact on society introduced between 1965 and 1992, public funding was "instrumental" for 15. As of 2011 NIH-supported research helped to discover 153 new FDA-approved drugs, vaccines, and new indications for drugs in the 40 years prior. One study found NIH funding aided either directly or indirectly in developing the drugs or drug targets for all of the 210 FDA-approved drugs from 2010 to 2016. In 2015, Pierre Azoulay et al. estimated $ 10 million invested in research generated two to three new patents. Since its inception,

3560-805: The Center for Cancer Research, Office of Scientific Operations, Management Operations Support Branch, the division of Cancer Epidemiology and Genetics and the division of Cancer Treatment and Diagnosis. The National Institute of Environmental Health Sciences is located in the Research Triangle region of North Carolina . Other ICs have satellite locations in addition to operations at the main campus. The National Institute of Allergy and Infectious Diseases maintains its Rocky Mountain Labs in Hamilton, Montana , with an emphasis on BSL3 and BSL4 laboratory work. NIDDK operates

3649-749: The Director. NIH submits its budget request to the Department of Health and Human Services (HHS), and the HHS considers this request as a portion of its budget. Many adjustments and appeals occur between NIH and HHS before the agency submits NIH's budget request to the Office of Management and Budget (OMB). OMB determines what amounts and research areas are approved for incorporation into the President's final budget. The President then sends NIH's budget request to Congress in February for

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3738-477: The Jewish Chronic Disease Hospital. When three doctors resigned after refusing to inject patients without their consent, the experiment gained considerable media attention. The NIH was a major source of funding for Southam's research and had required all research involving human subjects to obtain their consent prior to any experimentation. Upon investigating all of their grantee institutions,

3827-549: The NIH Toolbox was rolled out to the research community. NIH Toolbox assessments are based, where possible, on Item Response Theory and adapted for testing by computer. NIH sponsors the Database of Genotypes and Phenotypes (dbGaP), a repository of information produced by studies investigating the interaction of genotype and phenotype. The information includes phenotypes, molecular assay data, analyses and documents. Summary-level data

3916-461: The NIH budget doubled. For a time, funding essentially remained flat, and for seven years following the financial crisis, the NIH budget struggled to keep up with inflation. In 1999 Congress increased the NIH's budget by $ 2.3 billion to $ 17.2 billion in 2000. In 2009 Congress again increased the NIH budget to $ 31 billion in 2010. In 2017 and 2018, Congress passed laws with bipartisan support that substantially increasing appropriations for NIH, which

4005-437: The NIH but may apply for funding. Throughout the history of the NIH, the amount of funding received has increased, but the proportion to each IC remains relatively constant. The individual ICs then decide who will receive the grant money and how much will be allotted. Policy changes on who receives funding significantly affect researchers. For example, the NIH has recently attempted to approve more first-time NIH R01 applicants or

4094-471: The NIH discovered that the majority of them did not protect the rights of human subjects. From then on, the NIH has required all grantee institutions to approve any research proposals involving human experimentation with review boards. In 1967, the Division of Regional Medical Programs was created to administer grants for research for heart disease, cancer, and strokes . That same year, the NIH director lobbied

4183-429: The NIH has often been a source of contention in Congress, serving as a proxy for the political currents of the time. In 1992, the NIH encompassed nearly 1 percent of the federal government's operating budget and controlled more than 50 percent of all funding for health research, and 85 percent of all funding for health studies in universities. While government funding for research in other disciplines has been increasing at

4272-651: The NIH intramural research program has been a source of many pivotal scientific and medical discoveries. Some of these include: In September 2006, the NIH Blueprint for Neuroscience Research started a contract for the NIH Toolbox for the Assessment of Neurological and Behavioral Function to develop a set of state-of-the-art measurement tools to enhance collection of data in large cohort studies. Scientists from more than 100 institutions nationwide contributed. In September 2012,

4361-453: The NIH would take the balance of each study design into consideration when awarding grants. The announcement also stated that this rule would probably not apply when studying sex-specific diseases (for example, ovarian or testicular cancer). One of the goals of the NIH is to "expand the base in medical and associated sciences in order to ensure a continued high return on the public investment in research." Taxpayer dollars funding NIH are from

4450-484: The National Institute for General Medical Science awarded funding to 30% of applicants. NIH employs five broad decision criteria in its funding policy. First, ensure the highest quality of scientific research by employing an arduous peer review process. Second, seize opportunities that have the greatest potential to yield new knowledge and that will lead to better prevention and treatment of disease. Third, maintain

4539-551: The Phoenix Epidemiology and Clinical Research Branch in Phoenix, Arizona . As of 2017, 153 scientists receiving financial support from the NIH have been awarded a Nobel Prize and 195 have been awarded a Lasker Award . NIH devotes 10% of its funding to research within its own facilities (intramural research), and gives >80% of its funding in research grants to extramural (outside) researchers. Of this extramural funding,

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4628-612: The United States. The NIH conducts its own scientific research through the NIH Intramural Research Program (IRP) and provides major biomedical research funding to non-NIH research facilities through its Extramural Research Program. As of 2013 , the IRP had 1,200 principal investigators and more than 4,000 postdoctoral fellows in basic, translational, and clinical research, being the largest biomedical research institution in

4717-634: The White House for increased federal funding in order to increase research and the speed with which health benefits could be brought to the people. An advisory committee was formed to oversee the further development of the NIH and its research programs. By 1971 cancer research was in full force and President Nixon signed the National Cancer Act , initiating a National Cancer Program, President's Cancer Panel, National Cancer Advisory Board, and 15 new research, training, and demonstration centers. Funding for

4806-552: The beginning of a partnership with universities. In 1930, the Hygienic Laboratory was re-designated as the National Institute of Health by the Ransdell Act , and was given $ 750,000 to construct two NIH buildings at the Old Naval Observatory campus. In 1937, NIH absorbed the rest of the Division of Scientific Research, of which it was formerly part. In 1938, NIH moved to its current campus in Bethesda, Maryland . Over

4895-430: The completion of the rat genome sequence provides very key information, how these diseases relate to gene function requires an efficient method to create knockout rat models in which specific genomic sequences are manipulated. Most techniques for genetic manipulation, including random mutagenesis with a gene trap (retroviral-based and non-retroviral-based), gene knock-outs/knock-ins, and conditional mutations, depend upon

4984-467: The creation of vaccines against hepatitis , Haemophilus influenzae (HIB), and human papillomavirus (HPV). In 2019, the NIH was ranked number two in the world, behind Harvard University , for biomedical sciences in the Nature Index , which measured the largest contributors to papers published in a subset of leading journals from 2015 to 2018. In 1887, a laboratory for the study of bacteria,

5073-416: The creation of gene trap mutations (or adapted for generating transgenic animals), the transposase is supplied in trans on one plasmid and is co-transfected with a plasmid containing donor transposon, a recombinant transposon comprising a gene trap flanked by the binding sites for the transposase (ITRs). The transposase will catalyze the excision of the transposon from the plasmid and subsequent integration into

5162-843: The culture and manipulation of embryonic stem (ES) cells. Rat ES cells were only recently isolated and no demonstration of gene modification in them has been reported. Consequently, many genetic manipulation techniques widely used in the mouse are not possible in the rat. Until the commercial development of mobile DNA technology in 2007 and zinc-finger nuclease technology in 2009, there were only two technologies that could be used to produce rat models of human disease: cloning and chemical mutagenesis using N-ethyl-N-nitrosourea ( ENU ). Although cloning by somatic cell nuclear transfer (SCNT) could theoretically be used to create rats with specific mutations by mutating somatic cells, and then using these cells for SCNT, this approach has not been used successfully to create knockout rats. One problem with this strategy

5251-401: The distinction between rodent-specific and general mammalian phenotypes . Rat models have been used to advance many areas of medical research, including cardiovascular disease, psychiatric disorders (studies of behavioral intervention and addiction), neural regeneration , diabetes, transplantation , autoimmune disorders ( rheumatoid arthritis ), cancer , and wound & bone healing. While

5340-623: The draft sequence of a laboratory strain of the brown or Norway rat ( Rattus norvegicus ). Additional developments with zinc finger nuclease technology in 2009 led to the first knockout rat with targeted, germline-transmitted mutations. Knockout rat disease models for Parkinson's , Alzheimer's , hypertension , and diabetes using zinc-finger nuclease technology are being commercialized by SAGE Labs. Mice, rats, and humans share all but approximately 1% of each other's genes making rodents good model organisms for studying human gene function. Both mice and rats are relatively small, easily handled, have

5429-522: The federal government with the goals of stimulating pain research collaboration… and providing an important avenue for public involvement" ("Members of new", 2012). With a committee such as this research will not be conducted by each individual organization or person but instead a collaborating group which will increase the information available. With this hopefully more pain management will be available including techniques for those with arthritis. In 2020 Beth Darnall , American scientist and pain psychologist,

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5518-402: The gametophyte known as the antheridium and the egg cells by mitosis in a flask-shaped organ called the archegonium . Plant sperm cells are their only motile cells, often described as flagellate, but more correctly as ciliate. Bryophytes have 2 flagella, horsetails have up to 200 and the mature spermatozoa of the cycad Zamia pumila has up to 50,000 flagella. Cycads and Ginkgo biloba are

5607-506: The genes during meiosis ensures that the chromosomes of gametes are not exact duplicates of either of the sets of chromosomes carried in the parental diploid chromosomes but a mixture of the two. Artificial gametes, also known as in vitro derived gametes (IVD), stem cell-derived gametes (SCDGs), and in vitro generated gametes (IVG), are gametes derived from stem cells . The use of such artificial gametes would "necessarily require IVF techniques". Research shows that artificial gametes may be

5696-668: The genome by creating double-strand breaks in DNA at user-specified locations. Double strand breaks are important for site-specific mutagenesis in that they stimulate the cell's natural DNA-repair processes, namely homologous recombination and non-homologous end joining. When the cell uses the non-homologous end joining pathway to repair the double-strand break, the inherent inaccuracy of the repair often generates precisely targeted mutations. This results in embryos with targeted gene knockout. Standard microinjection techniques allow this technology to make knockout rats in 4–6 months. A major advantage of ZFN- and TALEN-mediated gene knockout relative to

5785-444: The genome. Integration within a coding region will capture the elements necessary for gene trap expression. PB possesses several ideal properties: (1) it preferentially inserts within genes (50 to 67% of insertions hit genes) (2) it exhibits no local hopping (widespread genomic coverage) (3) it is not sensitive to over-production inhibition in which elevated levels of the transposase cause decreased transposition 4) it excises cleanly from

5874-484: The institute on policy and procedures affecting the external research programs and provide a second level of review for all grant and cooperative agreement applications considered by the Institute for funding. In 2014, it was announced that the NIH is directing scientists to perform their experiments with both female and male animals, or cells derived from females as well as males if they are studying cell cultures, and that

5963-444: The laboratory. This technique could be used to create cell lines for medical applications and for studying the heredity of genetic disorders . Additionally, this technique could be used for human enhancement by selectively breeding for a desired genome or by using recombinant DNA technology to create enhancements that have not arisen in nature. Plants that reproduce sexually also produce gametes. However, since plants have

6052-694: The largest rat ENU mutagenesis project to date run by the Medical College of Wisconsin was able to produce only 9 knockout rat lines in a period of five years at an average cost of $ 200,000 per knockout line. Although some companies are still pursuing this strategy, the Medical College of Wisconsin has switched to a more efficient and commercially viable method using mobile DNA and CompoZr ZFN technology. Zinc finger nucleases (ZFNs) and Transcription Activator-Like Effector Nucleases (TALENs) are engineered DNA-binding proteins that facilitate targeted editing of

6141-530: The most common funding mechanism and include investigator-initiated projects. The roughly 27,000 to 29,000 R01 applications had a funding success of 17-19% during 2012 though 2014. Similarly, the 13,000 to 14,000 R21 applications had a funding success of 13-14% during the same period. In FY 2016, the total number of grant applications received by the NIH was 54,220, with approximately 19% being awarded funding. Institutes have varying funding rates. The National Cancer Institute awarded funding to 12% of applicants, while

6230-467: The mouse, which is commonly used to model human disease. Although published knockouts exist for approximately 60% of mouse genes, a large majority of common human diseases do not have a knockout mouse model. Knockout rat models are an alternative to mice that may enable the creation of new gene disruptions that are unavailable in the mouse. Knockout rat models can also complement existing transgenic mouse models. Comparing mouse and rat mutants can facilitate

6319-631: The next few decades, Congress would markedly increase funding of the NIH, and various institutes and centers within the NIH were created for specific research programs. In 1944, the Public Health Service Act was approved, and the National Cancer Institute became a division of NIH. In 1948, the name changed from National Institute of Health to National Institutes of Health. In the 1960s, virologist and cancer researcher Chester M. Southam injected HeLa cancer cells into patients at

6408-466: The next fiscal year's allocations. The House and Senate Appropriations Subcommittees deliberate and by fall, Congress usually appropriates funding. This process takes approximately 18 months before the NIH can allocate any actual funds. When a government shutdown occurs, the NIH continues to treat people who are already enrolled in clinical trials , but does not start any new clinical trials and does not admit new patients who are not already enrolled in

6497-526: The official date of publication. The NIH Public Access Policy was the first public access mandate for a U.S. public funding agency. In 2000, the Joint Economic Committee of Congress reported NIH research, which was funded at $ 16 billion a year in 2000, that some econometric studies had given a rate of return of 25 to 40 percent per year by reducing the economic cost of illness in the US. It found that of

6586-410: The only gymnosperms with motile sperm. In the flowering plants , the female gametophyte is produced inside the ovule within the ovary of the flower. When mature, the haploid gametophyte produces female gametes which are ready for fertilization. The male gametophyte is produced inside a pollen grain within the anther and is non-motile, but can be distributed by wind, water or animal vectors. When

6675-593: The programs and activities of all NIH components. The NIH Director plays an active role in shaping the agency's activities and outlook. The Director is responsible for providing leadership to the Institutes and Centers by identifying needs and opportunities, especially in efforts involving multiple Institutes. Within the Director's Office is the Division of Program Coordination, Planning and Strategic Initiatives with 12 divisions including: The Agency Intramural Research Integrity Officer "is directly responsible for overseeing

6764-462: The research grant applications of young scientists. To encourage the participation of young scientists, the application process has been shortened and made easier. In addition, first-time applicants are being offered more funding for their research grants than those who have received grants in the past. In 2011 and 2012, the Department of Health and Human Services Office of Inspector General published

6853-511: The resolution of all research misconduct allegations involving intramural research , and for promoting research integrity within the NIH Office of Intramural Research (OIR)." There is a Division of Extramural Activities, which has its own Director. The Office of Ethics has its own Director, as does the Office of Global Research. Intramural research is primarily conducted at the main campus in Bethesda, Maryland , and Rockville, Maryland , and

6942-467: The salmonid subfamily of elements, was “awoken” to form the transposon named Sleeping Beauty. SB, like other DNA transposons, mobilizes itself via a cut-and-paste mechanism whereby a transposase enzyme, encoded by the transposon itself, excises and re-integrates the transposon at other sites within the genome. The 340 amino acid SB protein recognizes inverted terminal repeats (ITRs) that flank the transposon; it binds to these sequences and catalyzes excision of

7031-406: The same advantages as small or large ones, they do worse than small ones in mobility and numbers, and worse than large ones in supply. In contrast to a gamete, which has only one set of chromosomes, a diploid somatic cell has two sets of homologous chromosomes , one of which is a copy of the chromosome set from the sperm and one a copy of the chromosome set from the egg cell. Recombination of

7120-415: The smaller type, called a sperm cell or spermatozoon. Sperm cells are small and motile due to the presence of a tail-shaped structure, the flagellum , that provides propulsion. In contrast, each egg cell or ovum is relatively large and non-motile. Oogenesis , the process of female gamete formation in animals, involves meiosis (including meiotic recombination ) of a diploid primary oocyte to produce

7209-599: The surrounding communities. The Bayview Campus in Baltimore , Maryland houses the research programs of the National Institute on Aging , National Institute on Drug Abuse , and National Human Genome Research Institute with nearly 1,000 scientists and support staff. The Frederick National Laboratory in Frederick, MD and the nearby Riverside Research Park, houses many components of the National Cancer Institute , including

7298-533: The taxpayers, making them the primary beneficiaries of advances in research. Thus, the general public is a key stakeholder in the decisions resulting from the NIH funding policy. However, some in the general public do not feel their interests are being represented, and individuals have formed patient advocacy groups to represent their own interests. Important stakeholders of the NIH funding policy include researchers and scientists. Extramural researchers differ from intramural researchers in that they are not employed by

7387-486: The transposon. SB then integrates into random sites within the genome, although some studies report very slight preferences for transcriptional units. There is also a simple requirement of a TA-dinucleotide at the target site, like all Tc1/mariner transposons. The SB transposon is a powerful tool for insertional mutagenesis in many vertebrate species. It recently exhibited especial utility for germ line mutagenesis in both mice and rats. There are several advantages that make SB

7476-408: The use of mobile DNA is that a particular gene can be uniquely and specifically targeted for knockout. In contrast, knockouts made using mobile DNA technology are random and are therefore unlikely to target the gene of interest. Mobile DNA (jumping gene) technology uses retrotransposons and transposons for the production of knockout rat models. This platform technology meets all of the criteria for

7565-414: The world, while, as of 2003, the extramural arm provided 28% of biomedical research funding spent annually in the U.S., or about US$ 26.4 billion. The NIH comprises 27 separate institutes and centers of different biomedical disciplines and is responsible for many scientific accomplishments, including the discovery of fluoride to prevent tooth decay , the use of lithium to manage bipolar disorder , and

7654-666: Was 37.3 billion dollars annually in FY2018. Researchers at universities or other institutions outside of NIH can apply for research project grants (RPGs) from the NIH. There are numerous funding mechanisms for different project types (e.g., basic research, clinical research, etc.) and career stages (e.g., early career, postdoc fellowships, etc.). The NIH regularly issues "requests for applications" (RFAs), e.g., on specific programmatic priorities or timely medical problems (such as Zika virus research in early 2016). In addition, researchers can apply for "investigator-initiated grants" whose subject

7743-455: Was appointed as scientific member of the group. To allocate funds, the NIH must first obtain its budget from Congress. This process begins with institute and center (IC) leaders collaborating with scientists to determine the most important and promising research areas within their fields. IC leaders discuss research areas with NIH management who then develops a budget request for continuing projects, new research proposals, and new initiatives from

7832-450: Was introduced by the German cytologist Eduard Strasburger in 1878. Gametes of both mating individuals can be the same size and shape, a condition known as isogamy . By contrast, in the majority of species, the gametes are of different sizes, a condition known as anisogamy or heterogamy that applies to humans and other mammals. The human ovum has approximately 100,000 times the volume of

7921-576: Was reported in newspaper articles from 1981, no funding was provided for research on the disease. In 1984 National Cancer Institute scientists found implications that "variants of a human cancer virus called HTLV-III are the primary cause of acquired immunodeficiency syndrome (AIDS)," a new epidemic that gripped the nation. In 1992, the NIH encompassed nearly 1 percent of the federal government's operating budget and controlled more than 50 percent of all funding for health research and 85 percent of all funding for health studies in universities. From 1993 to 2001

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