A knockout mouse , or knock-out mouse , is a genetically modified mouse ( Mus musculus ) in which researchers have inactivated, or " knocked out ", an existing gene by replacing it or disrupting it with an artificial piece of DNA . They are important animal models for studying the role of genes which have been sequenced but whose functions have not been determined. By causing a specific gene to be inactive in the mouse, and observing any differences from normal behaviour or physiology, researchers can infer its probable function.
51-539: Gustducin is a G protein associated with taste and the gustatory system , found in some taste receptor cells. Research on the discovery and isolation of gustducin is recent. It is known to play a large role in the transduction of bitter, sweet and umami stimuli. Its pathways (especially for detecting bitter stimuli) are many and diverse. An intriguing feature of gustducin is its similarity to transducin . These two G proteins have been shown to be structurally and functionally similar, leading researchers to believe that
102-440: A family of proteins that act as molecular switches inside cells, and are involved in transmitting signals from a variety of stimuli outside a cell to its interior. Their activity is regulated by factors that control their ability to bind to and hydrolyze guanosine triphosphate (GTP) to guanosine diphosphate (GDP). When they are bound to GTP, they are 'on', and, when they are bound to GDP, they are 'off'. G proteins belong to
153-418: A collision coupling mechanism is thought to occur. The G protein triggers a cascade of further signaling events that finally results in a change in cell function. G protein-coupled receptors and G proteins working together transmit signals from many hormones , neurotransmitters , and other signaling factors. G proteins regulate metabolic enzymes , ion channels , transporter proteins , and other parts of
204-446: A common mechanism. They are activated in response to a conformational change in the GPCR, exchanging GDP for GTP, and dissociating in order to activate other proteins in a particular signal transduction pathway. The specific mechanisms, however, differ between protein types. Receptor-activated G proteins are bound to the inner surface of the cell membrane . They consist of the G α and
255-430: A different array of tissues. There is variability in the whole procedure depending largely on the strain from which the stem cells have been derived. Generally cells derived from strain 129 are used. This specific strain is not suitable for many experiments (e.g., behavioural), so it is very common to backcross the offspring to other strains. Some genomic loci have been proven very difficult to knock out. Reasons might be
306-411: A gene also may fail to produce an observable change in a mouse or may even produce different characteristics from those observed in humans in which the same gene is inactivated. For example, mutations in the p53 gene are associated with more than half of human cancers and often lead to tumours in a particular set of tissues. However, when the p53 gene is knocked out in mice, the animals develop tumours in
357-480: A gene family of only a few dozen members. It is believed that bitter taste receptors evolved as a mechanism to avoid ingesting poisonous and harmful substances. If this is the case, one might expect different species to develop different bitter taste receptors based on dietary and geographical constraints. With the exception of T2R1 (which lies on chromosome 5 ) all human bitter taste receptor genes can be found clustered on chromosome 7 and chromosome 12 . Analyzing
408-725: A model of gustducin's role and functionality in taste transduction. Other G protein α-subunits have been identified in TRCs (e.g. Gαi-2, Gαi-3, Gα14, Gα15, Gαq, Gαs) with function that has not yet been determined. While gustducin was known to be expressed in some taste receptor cells (TRCs), studies with rats showed that gustducin was also present in a limited subset of cells lining the stomach and intestine. These cells appear to share several feature of TRCs. Another study with humans brought to light two immunoreactive patterns for α-gustducin in human circumavallate and foliate taste cells: plasmalemmal and cytosolic . These two studies showed that gustducin
459-488: A myriad downstream targets. The cAMP-dependent pathway is used as a signal transduction pathway for many hormones including: G αi inhibits the production of cAMP from ATP. e.g. somatostatin, prostaglandins G αq/11 stimulates the membrane-bound phospholipase C beta, which then cleaves phosphatidylinositol 4,5-bisphosphate (PIP 2 ) into two second messengers, inositol trisphosphate (IP 3 ) and diacylglycerol (DAG). IP 3 induces calcium release from
510-507: A person can choose to ignore the taste of a substance. Ronzegurt suggests that the presence of gustducin in epithelial cells in the stomach and gastrointestinal tract are indicative of another line of defense against ingested toxins. Whereas taste cells in the mouth are designed to compel a person to spit out a toxin, these stomach cells may act to force a person to spit up the toxins in the form of vomit . G protein G proteins , also known as guanine nucleotide-binding proteins , are
561-589: A similar gene may cause or contribute to disease in humans. Examples of research in which knockout mice have been useful include studying and modeling different kinds of cancer , obesity , heart disease , diabetes , arthritis , substance abuse , anxiety , aging and Parkinson's disease . Knockout mice also offer a biological and scientific context in which drugs and other therapies can be developed and tested. Millions of knockout mice are used in experiments each year. There are several thousand different strains of knockout mice. Many mouse models are named after
SECTION 10
#1733084562027612-443: A transient increase of IP 3 - occurred within 50-100 millisecond of stimulation. This was not unexpected, as it was known that transducin was capable of sending signals within rod and cone cells at similar speeds. This indicated that IP 3 was one of the second messengers used in bitter taste transduction. It was later discovered that cAMP also causes an influx of cations during bitter and some sweet taste transduction, leading to
663-402: Is a GPCRG s -cAMP pathway. This pathway starts with sucrose and other sugars activating G s inside the cell through a membrane-bound GPCR. The activated G as activates adenylyl cyclase to generate cAMP. From this point, one of two pathways can be taken. cAMP may act directly to cause an influx of cations through cAMP- gated channels or cAMP can activate protein kinase A , which causes
714-443: Is distributed through gustatory tissue and some gastric and intestinal tissue and gustducin is presented either in the cytoplasm or in apical membranes on TRC surfaces. Research showed that bitter-stimulated type 2 taste receptors (T2R/TRB) are only found in taste receptor cells positive for the expression of gustducin. α-Gustducin is selectively expressed in ~25–30% of TRCs Due to its structural similarity to transducin, gustducin
765-571: Is estimated that about 30% of the modern drugs' cellular targets are GPCRs." The human genome encodes roughly 800 G protein-coupled receptors , which detect photons of light, hormones, growth factors, drugs, and other endogenous ligands . Approximately 150 of the GPCRs found in the human genome still have unknown functions. Whereas G proteins are activated by G protein-coupled receptors , they are inactivated by RGS proteins (for "Regulator of G protein signalling"). Receptors stimulate GTP binding (turning
816-538: Is homologous to the Ras GTPases and is also called the Ras superfamily GTPases . In order to associate with the inner leaflet of the plasma membrane, many G proteins and small GTPases are lipidated , that is, covalently modified with lipid extensions. They may be myristoylated , palmitoylated or prenylated . Knock-out mice Mice are currently the laboratory animal species most closely related to humans for which
867-499: Is suspected that decreased cAMPs may act on protein kinases which would regulate taste receptor cell ion channel activity. It is also possible that cNMP levels directly regulate the activity of cNMP-gated channels and cNMP-inhibited ion channels expressed in taste receptor cells. The βγ-gustducin pathway continues with the activation of IP 3 receptors and the release of Ca followed by neurotransmitter release. Bitter taste transduction models Several models have been suggested for
918-428: The beta-gamma complex . Heterotrimeric G proteins located within the cell are activated by G protein-coupled receptors (GPCRs) that span the cell membrane . Signaling molecules bind to a domain of the GPCR located outside the cell, and an intracellular GPCR domain then in turn activates a particular G protein. Some active-state GPCRs have also been shown to be "pre-coupled" with G proteins, whereas in other cases
969-512: The endoplasmic reticulum . DAG activates protein kinase C . The Inositol Phospholipid Dependent Pathway is used as a signal transduction pathway for many hormones including: Small GTPases, also known as small G-proteins, bind GTP and GDP likewise, and are involved in signal transduction . These proteins are homologous to the alpha (α) subunit found in heterotrimers, but exist as monomers. They are small (20-kDa to 25-kDa) proteins that bind to guanosine triphosphate ( GTP ). This family of proteins
1020-510: The phosphorylation of K+ channels, thus closing the channels, allowing for depolarization of the taste cell, subsequent opening of voltage-gated Ca channels and causing neurotransmitter release . The second pathway is a GPCR-G q /Gβγ-IP 3 pathway which is used with artificial sweeteners. Artificial sweeteners bind and activate GPCRs coupled to PLCβ 2 by either α-G q or Gβγ. The activated subunits activate PLCβ 2 to generate IP 3 and DAG. IP 3 and DAG elicit Ca release from
1071-568: The "large" G proteins, are activated by G protein-coupled receptors and are made up of alpha (α), beta (β), and gamma (γ) subunits . "Small" G proteins (20-25kDa) belong to the Ras superfamily of small GTPases . These proteins are homologous to the alpha (α) subunit found in heterotrimers, but are in fact monomeric, consisting of only a single unit. However, like their larger relatives, they also bind GTP and GDP and are involved in signal transduction . Different types of heterotrimeric G proteins share
SECTION 20
#17330845620271122-509: The 2007 Nobel Prize in Physiology or Medicine . Aspects of the technology for generating knockout mice, and the mice themselves have been patented in many countries by private companies. Knocking out the activity of a gene provides information about what that gene normally does. Humans share many genes with mice. Consequently, observing the characteristics of knockout mice gives researchers information that can be used to better understand how
1173-462: The G α protein. They work instead by lowering the required activation energy for the reaction to take place. G αs activates the cAMP-dependent pathway by stimulating the production of cyclic AMP (cAMP) from ATP . This is accomplished by direct stimulation of the membrane-associated enzyme adenylate cyclase . cAMP can then act as a second messenger that goes on to interact with and activate protein kinase A (PKA). PKA can phosphorylate
1224-416: The G protein on). RGS proteins stimulate GTP hydrolysis (creating GDP, thus turning the G protein off). All eukaryotes use G proteins for signaling and have evolved a large diversity of G proteins. For instance, humans encode 18 different G α proteins, 5 G β proteins, and 12 G γ proteins. G protein can refer to two distinct families of proteins. Heterotrimeric G proteins , sometimes referred to as
1275-454: The cell machinery, controlling transcription , motility , contractility , and secretion , which in turn regulate diverse systemic functions such as embryonic development , learning and memory, and homeostasis . G proteins were discovered in 1980 when Alfred G. Gilman and Martin Rodbell investigated stimulation of cells by adrenaline . They found that when adrenaline binds to a receptor,
1326-476: The conclusion that it also acted as a second messenger to gustducin. When bitter-stimulated T2R/TRB receptors activate gustducin heterotrimers, gustducin acts to mediate two responses in taste receptor cells: a decrease in cAMPs triggered by α-gustducin, and a rise in IP 3 ( Inositol trisphosphate ) and diacylglycerol (DAG) from βγ-gustducin. Although the following steps of the α-gustducin pathway are unconfirmed, it
1377-491: The endoplasmic reticulum and cause cellular depolarization. An influx of Ca triggers neurotransmitter release. While these two pathways coexist in the same TRCs, it is unclear how the receptors selectively mediate cAMP responses to sugars and IP 3 responses to artificial sweeteners . Of the five basic tastes , three ( sweet , bitter and umami tastes) are mediated by receptors from the G protein-coupled receptor family. Mammalian bitter taste receptors (T2Rs) are encoded by
1428-481: The enzymes that trigger protein phosphorylation in response to cAMP , and consequent metabolic processes such as glycogenolysis . Prominent examples include (in chronological order of awarding): G proteins are important signal transducing molecules in cells. "Malfunction of GPCR [G Protein-Coupled Receptor] signaling pathways are involved in many diseases, such as diabetes , blindness, allergies, depression, cardiovascular defects, and certain forms of cancer . It
1479-600: The gene being investigated. At times, loss of activity during development may mask the role of the gene in the adult state, especially if the gene is involved in numerous processes spanning development. Conditional/inducible mutation approaches are then required that first allow the mouse to develop and mature normally prior to ablation of the gene of interest. Another serious limitation is a lack of evolutive adaptations in knockout model that might occur in wild type animals after they naturally mutate. For instance, erythrocyte-specific coexpression of GLUT1 with stomatin constitutes
1530-565: The gene that has been inactivated. For example, the p53 knockout mouse is named after the p53 gene which codes for a protein that normally suppresses the growth of tumours by arresting cell division and/or inducing apoptosis. Humans born with mutations that deactivate the p53 gene have Li-Fraumeni syndrome , a condition that dramatically increases the risk of developing bone cancers, breast cancer and blood cancers at an early age. Other mouse models are named according to their physical characteristics or behaviours. There are several variations to
1581-471: The genes on chromosome 7. Recent work by Enrique Rozengurt has shed some light on the presence of gustducin in the stomach and gastrointestinal tract. His work suggests that gustducin is present in these areas as a defense mechanism. It is widely known that some drugs and toxins can cause harm and even be lethal if ingested. It has already been theorized that multiple bitter taste reception pathways exist to prevent harmful substances from being ingested, but
Gustducin - Misplaced Pages Continue
1632-409: The genetically altered embryos cannot grow into adult mice. This problem is often overcome through the use of conditional mutations . The lack of adult mice limits studies to embryonic development and often makes it more difficult to determine a gene's function in relation to human health . In some instances, the gene may serve a different function in adults than in developing embryos. Knocking out
1683-455: The hydrolysis of GTP to GDP, thus terminating the transduced signal. In some cases, the effector itself may possess intrinsic GAP activity, which then can help deactivate the pathway. This is true in the case of phospholipase C -beta, which possesses GAP activity within its C-terminal region. This is an alternate form of regulation for the G α subunit. Such G α GAPs do not have catalytic residues (specific amino acid sequences) to activate
1734-411: The knock-out mice. Until recently, the nature of gustducin and its second messengers was unclear. It was clear, however, that gustducin transduced intracellular signals. Spielman was one of the first to look at the speed of taste reception, utilizing the quenched-flow technique. When the taste cells were exposed to the bitter stimulants denatonium and sucrose octaacetate, the intracellular response -
1785-452: The knockout technique can easily be applied. They are widely used in knockout experiments, especially those investigating genetic questions that relate to human physiology . Gene knockout in rats is much harder and has only been possible since 2003. The first recorded knockout mouse was created by Mario R. Capecchi , Martin Evans , and Oliver Smithies in 1989, for which they were awarded
1836-431: The larger group of enzymes called GTPases . There are two classes of G proteins. The first function as monomeric small GTPases (small G-proteins), while the second function as heterotrimeric G protein complexes . The latter class of complexes is made up of alpha (G α ), beta (G β ) and gamma (G γ ) subunits . In addition, the beta and gamma subunits can form a stable dimeric complex referred to as
1887-616: The mechanisms regarding the transduction of bitter taste signals. It is thought that these five diverse mechanisms have developed as defense mechanisms. This would imply that many different poisonous or harmful bitter agents exist and these five mechanisms exist to prevent humans from eating or drinking them. It is also possible that some mechanisms can act as backups should a primary mechanism fail. One example of this could be quinine, which has been shown to both inhibit and activate PDE in bovine taste tissue. There are currently two models proposed for sweet taste transduction. The first pathway
1938-418: The original taste ability returned. However, the loss of the α-gustducin gene did not completely remove the ability of the knock-out mice to taste bitter food, indicating that α-gustducin is not the only mechanism for tasting bitter food. It was thought at the time that an alternative mechanism of bitter taste detection could be associated with the βγ subunit of gustducin. This theory was later validated when it
1989-404: The presence of repetitive sequences, extensive DNA methylation , or heterochromatin . The confounding presence of neighbouring 129 genes on the knockout segment of genetic material has been dubbed the "flanking-gene effect". Methods and guidelines to deal with this problem have been proposed. Another limitation is that conventional (i.e. non-conditional) knockout mice develop in the absence of
2040-551: The procedure of producing knockout mice; the following is a typical example. A detailed explanation of how knockout (KO) mice are created is located at the website of the Nobel Prize in Physiology or Medicine 2007. The National Institutes of Health discusses some important limitations of this technique. While knockout mouse technology represents a valuable research tool, some important limitations exist. About 15 percent of gene knockouts are developmentally lethal, which means that
2091-554: The receptor does not stimulate enzymes (inside the cell) directly. Instead, the receptor stimulates a G protein, which then stimulates an enzyme. An example is adenylate cyclase , which produces the second messenger cyclic AMP . For this discovery, they won the 1994 Nobel Prize in Physiology or Medicine . Nobel prizes have been awarded for many aspects of signaling by G proteins and GPCRs. These include receptor antagonists , neurotransmitters , neurotransmitter reuptake , G protein-coupled receptors , G proteins, second messengers ,
Gustducin - Misplaced Pages Continue
2142-406: The receptor is able to activate the next G protein. The G α subunit will eventually hydrolyze the attached GTP to GDP by its inherent enzymatic activity, allowing it to re-associate with G βγ and starting a new cycle. A group of proteins called Regulator of G protein signalling (RGSs), act as GTPase-activating proteins (GAPs), are specific for G α subunits. These proteins accelerate
2193-631: The receptor to function as a guanine nucleotide exchange factor (GEF) that exchanges GDP for GTP. The GTP (or GDP) is bound to the G α subunit in the traditional view of heterotrimeric GPCR activation. This exchange triggers the dissociation of the G α subunit (which is bound to GTP) from the G βγ dimer and the receptor as a whole. However, models which suggest molecular rearrangement, reorganization, and pre-complexing of effector molecules are beginning to be accepted. Both G α -GTP and G βγ can then activate different signaling cascades (or second messenger pathways ) and effector proteins, while
2244-500: The relationships between bitter taste receptor genes show that the genes on the same chromosome are more closely related to each other than genes on different chromosomes. Furthermore, the genes on chromosome 12 have higher sequence similarity than the genes found on chromosome 7. This indicates that these genes evolved via tandem gene duplications and that chromosome 12, as a result of its higher sequence similarity between its genes, went through these tandem duplications more recently than
2295-521: The sense of taste evolved in a similar fashion to the sense of sight . Gustducin is a heterotrimeric protein composed of the products of the GNAT3 (α-subunit), GNB1 (β-subunit) and GNG13 (γ-subunit). Gustducin was discovered in 1992 when degenerate oligonucleotide primers were synthesized and mixed with a taste tissue cDNA library . The DNA products were amplified by the polymerase chain reaction method, and eight positive clones were shown to encode
2346-411: The signal transduction of denatonium and quinine. The 1992 research also investigated the role of gustducin in bitter taste reception by using "knock-out" mice lacking the gene for α-gustducin. A taste test with knock-out and control mice revealed that the knock-out mice showed no preference between bitter and regular food in most cases. When the α-gustducin gene was re-inserted into the knock-out mice ,
2397-778: The structural similarities, the two proteins have very different functionalities. However, the two proteins have similar mechanism and capabilities. Transducin removes the inhibition from cGMP Phosphodiesterase , which leads to the breakdown of cGMP. Similarly, α-gustducin binds the inhibitory subunits of taste cell cAMP Phosphodiesterase which causes a decrease in cAMP levels. Also, the terminal 38 amino acids of α-gustducin and α-transducin are identical. This suggests that gustducin can interact with opsin and opsin-like G-coupled receptors. Conversely, this also suggests that transducin can interact with taste receptors . The structural similarities between gustducin and transducin are so great that comparison with transducin were used to propose
2448-409: The tightly associated G βγ subunits. There are four main families of G α subunits: Gα s (G stimulatory), Gα i (G inhibitory), Gα q/11 , and Gα 12/13 . They behave differently in the recognition of the effector molecule, but share a similar mechanism of activation. When a ligand activates the G protein-coupled receptor , it induces a conformational change in the receptor that allows
2499-496: The α subunits of G-proteins, (which interact with G-protein-coupled receptors ). Of these eight, two had previously been shown to encode rod and cone α- transducin . The eighth clone, α-gustducin, was unique to the gustatory tissue. Upon analyzing the amino-acid sequence of α-gustducin, it was discovered that α-gustducins and α-transducins were closely related. This work showed that α-gustducin's protein sequence gives it 80% identity to both rod and cone a-transducin. Despite
2550-422: Was discovered that both peripheral and central gustatory neurons typically respond to more than one type of taste stimulant, although a neuron typically would favor one specific stimulant over others. This suggests that, while many neurons favor bitter taste stimuli, neurons that favor other stimuli such as sweet and umami may be capable of detecting bitter stimuli in the absence of bitter stimulant receptors, as with
2601-518: Was predicted to activate a phosphodiesterase (PDE). Phosphodieterases were found in taste tissues and their activation was tested in vitro with both gustducin and transducin. This experiment revealed transducin and gustducin were both expressed in taste tissue (1:25 ratio) and that both G proteins are capable of activating retinal PDE. Furthermore, when present with denatonium and quinine, both G proteins can activate taste specific PDEs. This indicated that both gustducin and transducin are important in
SECTION 50
#1733084562027#26973