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Culicoides

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Genus ( / ˈ dʒ iː n ə s / ; pl. : genera / ˈ dʒ ɛ n ər ə / ) is a taxonomic rank above species and below family as used in the biological classification of living and fossil organisms as well as viruses . In binomial nomenclature , the genus name forms the first part of the binomial species name for each species within the genus.

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45-840: Numerous, see text Culicoides is a genus of biting midges in the family Ceratopogonidae . There are over 1000 species in the genus, which is divided into many subgenera. Several species are known to be vectors of various diseases and parasites which can affect animals. The genus has a long fossil record, with earliest known fossils being from Burmese amber , around 99 million years old. The systematics and taxonomy of this genus are confused. A large number of species are of unknown relation to those that have been assigned to subgenera already. Furthermore, many subgenera are sometimes elevated to full genus status, or additional genera (such as Paradasyhelea ) are included as subgenera herein. A widely cited, periodically updated, subgeneric classification of species of Culicoides begins with

90-557: A species : see Botanical name and Specific name (zoology) . The rules for the scientific names of organisms are laid down in the nomenclature codes , which allow each species a single unique name that, for animals (including protists ), plants (also including algae and fungi ) and prokaryotes ( bacteria and archaea ), is Latin and binomial in form; this contrasts with common or vernacular names , which are non-standardized, can be non-unique, and typically also vary by country and language of usage. Except for viruses ,

135-426: A fused cephalothorax with slender respiratory trumpets and a segmented abdomen. Adults emerge through a straight slit after 3–7 days. Species of Culicoides feed on a variety of mammal hosts, including humans. The bite of Culicoides is felt as a sharp prick and is often followed by irritating lumps that may disappear in a few hours or last for days. Various Culicoides species have been shown to be vectors for

180-643: A later homonym of a validly published name is a nomen illegitimum or nom. illeg. ; for a full list refer to the International Code of Nomenclature for algae, fungi, and plants and the work cited above by Hawksworth, 2010. In place of the "valid taxon" in zoology, the nearest equivalent in botany is " correct name " or "current name" which can, again, differ or change with alternative taxonomic treatments or new information that results in previously accepted genera being combined or split. Prokaryote and virus codes of nomenclature also exist which serve as

225-621: A long time and redescribed as new by a range of subsequent workers, or if a range of genera previously considered separate taxa have subsequently been consolidated into one. For example, the World Register of Marine Species presently lists 8 genus-level synonyms for the sperm whale genus Physeter Linnaeus, 1758, and 13 for the bivalve genus Pecten O.F. Müller, 1776. Within the same kingdom, one generic name can apply to one genus only. However, many names have been assigned (usually unintentionally) to two or more different genera. For example,

270-505: A nucleocapsid protein (N) and, in an alternative overlapping reading frame , a second nonstructural protein (NSs). The genomic RNA segments are encapsidated by copies of the N protein in the form of ribonucleoprotein (RNP) complexes. The N protein is the most abundant protein in virus particles and infected cells and, therefore, the main target in many serological and molecular diagnostics. The virus causes two different profiles of Schmallenberg: These disease signs have occurred during

315-563: A proboscis, limiting their ability to bite through clothing. Both males and females feed on nectar, however only the females take a blood meal, which is needed for the maturation of fertilized eggs. Females typically bite at dusk or dawn often in dense swarms and usually in the vicinity of water, marshes or rotting vegetation. Females lay their eggs en masse in a range of habitats ranging from water vegetation, slow running streams, damp soil or on manure heaps. These hatch into tiny smooth white larvae with four pairs of anal gills. Pupae consist of

360-409: A reference for designating currently accepted genus names as opposed to others which may be either reduced to synonymy, or, in the case of prokaryotes, relegated to a status of "names without standing in prokaryotic nomenclature". An available (zoological) or validly published (botanical) name that has been historically applied to a genus but is not regarded as the accepted (current/valid) name for

405-427: A taxon; however, the names published in suppressed works are made unavailable via the relevant Opinion dealing with the work in question. In botany, similar concepts exist but with different labels. The botanical equivalent of zoology's "available name" is a validly published name . An invalidly published name is a nomen invalidum or nom. inval. ; a rejected name is a nomen rejiciendum or nom. rej. ;

450-455: A total of c. 520,000 published names (including synonyms) as at end 2019, increasing at some 2,500 published generic names per year. "Official" registers of taxon names at all ranks, including genera, exist for a few groups only such as viruses and prokaryotes, while for others there are compendia with no "official" standing such as Index Fungorum for fungi, Index Nominum Algarum and AlgaeBase for algae, Index Nominum Genericorum and

495-476: A virus by Culicoides is illustrated in the article Parasitic flies of domestic animals . Three species of Culicoides are established vectors for three species of Apicomplexan parasites of the genus Hepatocystis . In 2006, bluetongue virus was first recorded in Northern Europe. In 2007 and 2008, there were huge outbreaks, going as far as Norway, but in 2009 the outbreak was smaller. The main vector of

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540-596: Is discouraged by both the International Code of Zoological Nomenclature and the International Code of Nomenclature for algae, fungi, and plants , there are some five thousand such names in use in more than one kingdom. For instance, A list of generic homonyms (with their authorities), including both available (validly published) and selected unavailable names, has been compiled by the Interim Register of Marine and Nonmarine Genera (IRMNG). The type genus forms

585-590: Is now available from AdiaVet which targets the L region of the tripartite ssRNA genome of the virus. The disease was confirmed as present in the UK on 22 January 2012, on being formally identified in four sheep farms in Norfolk, Suffolk and East Sussex. By 27 February 2012, the disease was reported in other counties in the south of England including the Isle of Wight, Wiltshire, West Berkshire, Gloucestershire, Hampshire and Cornwall. It

630-460: Is somewhat arbitrary. Although all species within a genus are supposed to be "similar", there are no objective criteria for grouping species into genera. There is much debate among zoologists about whether enormous, species-rich genera should be maintained, as it is extremely difficult to come up with identification keys or even character sets that distinguish all species. Hence, many taxonomists argue in favor of breaking down large genera. For instance,

675-474: Is the type species , and the generic name is permanently associated with the type specimen of its type species. Should the specimen turn out to be assignable to another genus, the generic name linked to it becomes a junior synonym and the remaining taxa in the former genus need to be reassessed. In zoological usage, taxonomic names, including those of genera, are classified as "available" or "unavailable". Available names are those published in accordance with

720-401: Is typical for Bunyavirales viruses, which are a family of enveloped negative-sense single stranded RNA viruses with a genome split into three parts—Small (S), Medium (M) and Large (L). The L RNA segment encodes an RNA-dependent RNA polymerase (L protein), the M RNA segment encodes two surface glycoproteins (Gc and Gn) and a nonstructural protein (NSm), while the S RNA segment encodes

765-528: The Friedrich-Loeffler-Institut (German Research Institute for Animal Health). A risk assessment in December 2011 did not consider it likely to be a threat to human health, as other comparable viruses are not zoonotic . Immunity can possibly be acquired naturally against SBV. It is possible that the seasonality of the infection cycle would not entail a second epidemic circulation next year, due to

810-621: The International Code of Zoological Nomenclature ; the earliest such name for any taxon (for example, a genus) should then be selected as the " valid " (i.e., current or accepted) name for the taxon in question. Consequently, there will be more available names than valid names at any point in time; which names are currently in use depending on the judgement of taxonomists in either combining taxa described under multiple names, or splitting taxa which may bring available names previously treated as synonyms back into use. "Unavailable" names in zoology comprise names that either were not published according to

855-799: The International Plant Names Index for plants in general, and ferns through angiosperms, respectively, and Nomenclator Zoologicus and the Index to Organism Names for zoological names. Totals for both "all names" and estimates for "accepted names" as held in the Interim Register of Marine and Nonmarine Genera (IRMNG) are broken down further in the publication by Rees et al., 2020 cited above. The accepted names estimates are as follows, broken down by kingdom: The cited ranges of uncertainty arise because IRMNG lists "uncertain" names (not researched therein) in addition to known "accepted" names;

900-572: The cerebellum and an enlarged thymus . Blood samples from live animals with suspicious symptoms are taken for analysis. Dead or aborted foetuses suspected of having the virus are sampled by taking a piece of the brain or spleen for analysis. The samples are tested with the RT-PCR for Schmallenberg virus that has been developed by the Friedrich-Loeffler Institute in Germany. A commercial kit

945-404: The platypus belongs to the genus Ornithorhynchus although George Shaw named it Platypus in 1799 (these two names are thus synonyms ) . However, the name Platypus had already been given to a group of ambrosia beetles by Johann Friedrich Wilhelm Herbst in 1793. A name that means two different things is a homonym . Since beetles and platypuses are both members of the kingdom Animalia,

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990-469: The French botanist Joseph Pitton de Tournefort (1656–1708) is considered "the founder of the modern concept of genera". The scientific name (or the scientific epithet) of a genus is also called the generic name ; in modern style guides and science, it is always capitalised. It plays a fundamental role in binomial nomenclature , the system of naming organisms , where it is combined with the scientific name of

1035-442: The base for higher taxonomic ranks, such as the family name Canidae ("Canids") based on Canis . However, this does not typically ascend more than one or two levels: the order to which dogs and wolves belong is Carnivora ("Carnivores"). The numbers of either accepted, or all published genus names is not known precisely; Rees et al., 2020 estimate that approximately 310,000 accepted names (valid taxa) may exist, out of

1080-446: The current Culicoides classification needed to be revisited with modern tools. Species incertae sedis include: Adults are small dark insects about 1–3 mm long. The antennae are long (15 segments) densely haired in the males and less hairy in females. The thorax is hooped and carries a pair of broad mottled wings. Only the first two longitudinal veins are distinct. Midges are morphologically distinct from mosquitoes, lacking

1125-462: The following viruses and conditions: Mansonella spp. ( M. ozzardi , M. perstans , M. streptocerca ), Onchocerca gibsoni and O. cervicalis , Leucocytozoon , Plasmodium agamae , bluetongue virus , Oropouche virus , Schmallenberg virus , African horse sickness , bovine ephemeral fever ( C. osystoma and C. nipponesis ), Akabane virus , Queensland itch and epizootic hemorrhagic disease . A typical cycle of transmission of

1170-446: The form "author, year" in zoology, and "standard abbreviated author name" in botany. Thus in the examples above, the genus Canis would be cited in full as " Canis Linnaeus, 1758" (zoological usage), while Hibiscus , also first established by Linnaeus but in 1753, is simply " Hibiscus L." (botanical usage). Each genus should have a designated type , although in practice there is a backlog of older names without one. In zoology, this

1215-727: The generic name (or its abbreviated form) still forms the leading portion of the scientific name, for example, Canis lupus lupus for the Eurasian wolf subspecies, or as a botanical example, Hibiscus arnottianus ssp. immaculatus . Also, as visible in the above examples, the Latinised portions of the scientific names of genera and their included species (and infraspecies, where applicable) are, by convention, written in italics . The scientific names of virus species are descriptive, not binomial in form, and may or may not incorporate an indication of their containing genus; for example,

1260-432: The idea that a newly defined genus should fulfill these three criteria to be descriptively useful: Moreover, genera should be composed of phylogenetic units of the same kind as other (analogous) genera. The term "genus" comes from Latin genus , a noun form cognate with gignere ('to bear; to give birth to'). The Swedish taxonomist Carl Linnaeus popularized its use in his 1753 Species Plantarum , but

1305-630: The infection in the Northern Hemisphere summer and autumn of 2011, with animals subsequently giving birth from late 2011. Schmallenberg virus falls in the Simbu serogroup of orthobunyaviruses. It is considered to be most closely related to the Sathuperi and Douglas viruses. The virus is named after Schmallenberg , in North Rhine-Westphalia , Germany, from where the first definitive sample

1350-628: The largest component, with 23,236 ± 5,379 accepted genus names, of which 20,845 ± 4,494 are angiosperms (superclass Angiospermae). By comparison, the 2018 annual edition of the Catalogue of Life (estimated >90% complete, for extant species in the main) contains currently 175,363 "accepted" genus names for 1,744,204 living and 59,284 extinct species, also including genus names only (no species) for some groups. The number of species in genera varies considerably among taxonomic groups. For instance, among (non-avian) reptiles , which have about 1180 genera,

1395-531: The lizard genus Anolis has been suggested to be broken down into 8 or so different genera which would bring its ~400 species to smaller, more manageable subsets. Schmallenberg virus Schmallenberg orthobunyavirus , also called Schmallenberg virus , abbreviated SBV, is a virus that causes congenital malformations and stillbirths in cattle , sheep , goats , and possibly alpaca . It appears to be transmitted by midges ( Culicoides spp.), which are likely to have been most active in causing

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1440-595: The main vectors of bluetongue virus disease) were monophyletic, whereas the subgenus Oecacta was paraphyletic. The study validated the subgenus Remmia (= Schultzei group) as a valid subgenus, outside of the subgenus Oecacta . The authors also considered that in Europe, Culicoides obsoletus , Culicoides scoticus and Culicoides chiopterus should be part of the Obsoletus complex whereas Culicoides dewulfi should be excluded from this complex. The authors concluded that

1485-403: The most (>300) have only 1 species, ~360 have between 2 and 4 species, 260 have 5–10 species, ~200 have 11–50 species, and only 27 genera have more than 50 species. However, some insect genera such as the bee genera Lasioglossum and Andrena have over 1000 species each. The largest flowering plant genus, Astragalus , contains over 3,000 species. Which species are assigned to a genus

1530-428: The name could not be used for both. Johann Friedrich Blumenbach published the replacement name Ornithorhynchus in 1800. However, a genus in one kingdom is allowed to bear a scientific name that is in use as a generic name (or the name of a taxon in another rank) in a kingdom that is governed by a different nomenclature code. Names with the same form but applying to different taxa are called "homonyms". Although this

1575-498: The period when the disease vectors ( mosquitos , sandflies , midges ) are active, during the summer and autumn of 2011, mainly affecting cattle. Congenital malformations in newborn sheep, goats and calves are the most obvious symptoms. In many cases, the dam (female parent) apparently has not presented signs of illness. These cases have occurred from December 2011, especially in sheep. The major malformations observed were: scoliosis , hydrocephalus , arthrogryposis , hypoplasia of

1620-526: The provisions of the ICZN Code, e.g., incorrect original or subsequent spellings, names published only in a thesis, and generic names published after 1930 with no type species indicated. According to "Glossary" section of the zoological Code, suppressed names (per published "Opinions" of the International Commission of Zoological Nomenclature) remain available but cannot be used as the valid name for

1665-538: The shortness of the viraemic period (about 4 to 6 days post exposure, longer in affected foetuses). Vaccination is a possible option for controlling the disease as a vaccine exists for the similar Akabane virus . In March 2012, scientists of the Friedrich-Loeffler-Institut first succeeded in producing an electron microscope image of the Schmallenberg virus. The genetic structure of Schmallenberg virus

1710-497: The specific name particular to the wolf. A botanical example would be Hibiscus arnottianus , a particular species of the genus Hibiscus native to Hawaii. The specific name is written in lower-case and may be followed by subspecies names in zoology or a variety of infraspecific names in botany . When the generic name is already known from context, it may be shortened to its initial letter, for example, C. lupus in place of Canis lupus . Where species are further subdivided,

1755-412: The standard format for a species name comprises the generic name, indicating the genus to which the species belongs, followed by the specific epithet, which (within that genus) is unique to the species. For example, the gray wolf 's scientific name is Canis lupus , with Canis ( Latin for 'dog') being the generic name shared by the wolf's close relatives and lupus (Latin for 'wolf') being

1800-403: The taxon is termed a synonym ; some authors also include unavailable names in lists of synonyms as well as available names, such as misspellings, names previously published without fulfilling all of the requirements of the relevant nomenclatural code, and rejected or suppressed names. A particular genus name may have zero to many synonyms, the latter case generally if the genus has been known for

1845-566: The values quoted are the mean of "accepted" names alone (all "uncertain" names treated as unaccepted) and "accepted + uncertain" names (all "uncertain" names treated as accepted), with the associated range of uncertainty indicating these two extremes. Within Animalia, the largest phylum is Arthropoda , with 151,697 ± 33,160 accepted genus names, of which 114,387 ± 27,654 are insects (class Insecta). Within Plantae, Tracheophyta (vascular plants) make up

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1890-636: The virus in Southern Europe does not live in Northern Europe, so other species have been screened. Species belonging to the Culicoides obsoletus complex and the Culicoides pulicaris complex have been found capable of bluetongue transmission. Genus The composition of a genus is determined by taxonomists . The standards for genus classification are not strictly codified, so different authorities often produce different classifications for genera. There are some general practices used, however, including

1935-429: The virus species " Salmonid herpesvirus 1 ", " Salmonid herpesvirus 2 " and " Salmonid herpesvirus 3 " are all within the genus Salmonivirus ; however, the genus to which the species with the formal names " Everglades virus " and " Ross River virus " are assigned is Alphavirus . As with scientific names at other ranks, in all groups other than viruses, names of genera may be cited with their authorities, typically in

1980-443: The warning that the traditional approach to classification of species in this genus has led to " phylogenetic chaos". Some of the specific consequences are mentioned, as well as recommendations for future work. A molecular phylogeny based on 42 species from 3 continents was proposed in 2017. In this work, the authors found that the subgenera Monoculicoides , Culicoides , Haematomyidium , Hoffmania , Remmia and Avaritia (including

2025-681: Was derived. It was first reported in October 2011. After Germany, it has also been detected in the Netherlands , Belgium, France, Luxembourg , Italy, Spain, the United Kingdom, Switzerland, Ireland, Finland , Denmark, Sweden, Austria, Norway, Poland and Estonia . The virus has been recognised by the European Commission 's Standing Committee on the Food Chain and Animal Health and

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